miRanalyzer | Tool name | miRanalyzer |
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| URL | http://web.bioinformatics.cicbiogune.es/microRNA/miRanalyser.php |
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| Important features | 1. It is a free online tool for the mapping of small RNAs against known micro RNAs and non coding RNAs.
2. It can identify genes with new micro RNAs and are differentially expressed.
3. It can find perfect matches of all transcribed sequences and detects the known annotated microRNAs in miRBase. |
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| Citations | Hackenberg M, Sturm M, Langenberger D, Falcon-Perez JM, Aransay AM.
miRanalyzer: a microRNA detection and analysis tool for next-generation
sequencing experiments. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W68-76.
Epub 2009 May 11. PubMed PMID: 19433510; PubMed Central PMCID: PMC2703919.
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| Year of publication | 2009 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | RNA seq alignment |
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| Category | Free, Online |
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| License | |
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| Status | Working |
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| Platform | Illumina/Solexa, ABI SOLiD |
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